|
|
|
|
Microbatch ReferencesDescription of IMPAX (the predecessor of Oryx) and Oryx: N.E. Chayen, P.D. Shaw Stewart, P. Baldock. New Developments of the IMPAX Small-Volume Automated Crystallization System. Acta Crystallographica. D 50 (1994), pp 456-458. N.E. Chayen, P.D. Shaw Stewart, D.M. Blow. Microbatch Crystallization Under Oil - a New Technique Allowing Many Small-volume Crystallization Trials. Journal of Crystal Growth. 122 (1992), pp 176-180. N.E. Chayen, P.D. Shaw Stewart, D.L. Maeder, and D.M. Blow. An Automated System for Micro-batch Protein Crystallization and Screening. Journal of Applied Crystallography. 23 (1990), pp 297-302. A.K. Shah, Zhi-Jie Liu, P.D. Shaw Stewart, F.D. Schubot, J.P. Rose, M.G. Newton and B-C. Wang. On increasing protein-crystallization throughput for X-ray diffraction studies. Acta Crystallographica Section D 61(2005), pp 123-129 New methods and theoretical studies: Allan D’Arcy, Frederic Villarda, May Marsh. An automated microseed matrix-screening method for protein crystallization. Acta Crystallographica section D63 (2007), 550–554. (This paper describes the use of microseeding in the SCREENING step of crystallization - which has proved to be a very easy and powerful technique.) G. B. Mortuza, L.F. Haire, A. Stevens, S.J. Smerdon, J.P. Stoye, I.A. Taylor. High-resolution structure of a retroviral capsid hexameric amino-terminal domain. Nature 431 (2004), pp 481-485. (This paper describes the use of the vapor batch plate with isopropanol.) A. D'Arcy, A. Mac Sweeney, M. Stihle, A. Haber. The advantages of using a modified microbatch method for rapid screening of protein crystallization conditions. Acta Crystallographica section D 59 (2003), pp 396-399. P.F.M. Baldock, P.D. Shaw Stewart. Practical experimental design techniques for automatic and manual protein crystallization. Journal of Crystal Growth 196 (1999) 665 - 673 N.E. Chayen. Comparative studies of protein crystallization by vapor diffusion and microbatch. Acta Cryst. D54 (1998), pp 8 - 15. (This paper describes converting microbatch conditions to vapor diffusion, and also seems to be the first publication that mentions crystallization in less than 1 microlitre drops.) P.F.M. Baldock, V. Mills, P.D. Shaw Stewart. A comparison of microbatch and vapour diffusion for initial screening of crystallization conditions. Journal of Crystal Growth. 168 (1996), pp 170-174. A.D'Arcy, C.Elmore, M.Stihle, J.E.Johnston. A novel approach to crystallising proteins under oil. Journal of Crystal Growth 168 (1996) 175-180. P.D. Shaw Stewart, M. Khimasia. Predispensed Gradient Matrices - a New Rapid Method of Finding Crystallization Conditions. Acta Crystallographica. D 50 (1994), pp 441-442. E.E.G. Saridakis, P.D. Shaw Stewart, L.F. Lloyd, D.M. Blow. Phase Diagram and Dilution Experiments in the Crystallization of Carboxypeptidase G2. Acta Crystallographica. D 50 (1994), pp 293-297. D.M. Blow, N.E. Chayen, L.F. Lloyd, E. Saridakis. Control of Nucleation of Protein Crystals. Protein Science. 3 (1994), pp 1638-1643. N.E. Chayen, J. Radcliffe, D.M. Blow. The Control of Nucleation in the Crystallization of Lysozyme. Protein Science. 2 (1993), pp 113-118. L.F.Lloyd, P.Brick, D.M.Blow. Crystallization studies on HIV-1 reverse transcriptase. Journal of Crystal Growth. 122 (1992), pp 355-359. Successful crystallizations using microbatch (mainly early papers): R. J. Russell, L. F. Haire, D. J. Stevens, P. J. Collins, Y. P. Lin, G. M. Blackburn, A. J. Hay, S. J. Gamblin & J. J. Skehel. The structure of H5N1 avian influenza neuraminidase suggests new opportunities for drug design. Nature, (443) Sept 7, 2006 45-49 (N1 neuraminidase structure solved with only 0.6 mg of protein using Oryx8). S. Yamada, Y. Suzuki, T. Suzuki, M. Q. Le, C. A. Nidom, Y. Sakai-Tagawa, Y. Muramoto, M. Ito, M. Kiso, T. Horimoto, K. Shinya, T. Sawada, M. Kiso, T. Usui, T. Murata, Y. Lin, A. Hay, L. F. Haire, D. J. Stevens, R. J. Russell, S. J. Gamblin, J. J. Skehel & Y. Kawaoka. Haemagglutinin mutations responsible for the binding of H5N1 influenza A viruses to human-type receptors. Nature (444) 16 November 2006 doi:10.1038/nature05264 The structure of H5N1 avian influenza neuraminidase suggests new opportunities for drug design R. J. Russell, L. F. Haire, D. J. Stevens, P. J. Collins, Y. P. Lin, G. M. Blackburn, A. J. Hay, S. J. Gamblin & J. J. Skehel. Nature, (443) Sept 7, 2006 45-49 Y.Fujii, D.Okuda, Z.Fujimoto, T.Morita, H.Mizuno. Crystallization and preliminary crystallographic studies of dimeric disintegrins from the venom of two Agkistrodon snakes. Acta Cryst. (2002). D58, 145-147. C.A. Lesburg, M.B. Cable, E. Ferrari, Z. Hong, A.F. Mannarino, P.C. Weber. Crystal structure of the RNA-dependent RNA polymerase from hepatitis C virus reveals a fully encircled active site. Nature Structural Biology. 6 (1999), 10, pp 937-943. H. Erlandsen, A. Martinez, P.M. Knappskog, J. Haavik, E Hough, T. Flatmark. Crystallization and preliminary diffraction analysis of a truncated homodimer of human phenylalanine hydroxylase. Febs Letters. 406 (1997), 1-2, pp 171-174. S.W. Cowan-Jacob, J. Rahuel, A. Nagai, G. Iwasaki, D. Ohta. Crystallization and preliminary crystallogrphic analysis of cabbage histidinol dehydrogenase. Acta Crystallographica. D 52 (1996), 6, pp 1188-1190. Y. Korkhin, F. Frolow, O. Bogin, M. Peretz, A.J. Kalb, Y. Burstein. Crystalline alcohol dehydrogenases from the mesophilic bacterium Clostridium beijerinckii and the thermophilic bacterium Thermoanaerobium brockii: preparation, characterization and molecular symmetry. Acta Crystallographica. D 52 (1996), pp 882-886. Prodromou, P.W. Piper, L.H. Pearl. Expression and crystallization of the yeast Hsp82 chaperone, and preliminary x-ray diffraction studies of the amino-terminal domain. Proteins-Structure Function and Genetics. 25 (1996), 4, pp 517-522. Shinzawa-Itoh, H. Ueda, S. Yoshikawa, H. Aoyama, E. Yamashita, T. Tsukihara. Effects of Ethyleneglycol Chain Length of Dodecyl Polyethyleneglycol Monoether on the Crystallization of Bovine Heart Cytochrome c Oxidase. Journal of Molecular Biology. 246 (1995), pp 57-57. J. Thomson, G.S. Ratnaparkhi, R. Varadarajan, J.M. Sturtevant, F.M. Richards. Thermodynamics and Structural Consequences of Changing a Sulfur Atom to a Methylene Group in the M13Nle Mutation in Ribonuclease-S. Biochemistry. 33 (1994), pp 858-859. G.G. Lilley, J.A.R.G. Barbosa, L.A. Pearce. Expression in escherichia coli of the putative N-acetylneuraminate lyase gene (nanA) from haemophilus influenzae: Overproduction, purification, and crystallization. Protein Expression and Purification. 12 (1998), 3, pp 295-304. T.E. Barrett, R. Savva, G. Panayotou, T. Barlow, T. Brown, J. Jiricny, L.H. Pearl. Crystal structure of a G: T/U mismatch-specific DNA glycosylase: Mismatch recognition by complementary-strand interactions. Cell. 92 (1998), 1, pp 117-129. Panayotou, T. Brown, T. Barlow, L.H. Pearl, R. Savva. Direct measurement of the substrate preference of uracil-DNA glycosylase. Journal of Biological Chemistry. 273 (1998), 1, pp 45-50. G. Zhou, G. Parthasarathy, T. Somasundaram, A. Ables, L. Roy, S. Strong, W.R. Ellington, M. Chapman. Expression, purification from inclusion bodies, and crystal characterization of a transition state analog complex of arginine kinase: A model for studying phosphagen kinases. Protein Science. 6 (1997), 2, pp 444-449. N.E. Chayen, E. Conti, C. Vieille, J.G. Zeikus. Crystallization and initial x-ray analysis of xylose isomerase from Thermotoga neapolitana. Acta Crystallographica. D 53 (1997), 2, pp 229-230. F. Sica, S. Adinolfi, L. Vitagliano, A. Zagari, S. Capasso, L. Mazzarella. Cosolute effect on crystallization of two dinucleotide complexes of bovine seminal ribonuclease from concentrated salt solutions. Journal of Crystal Growth. 168 (1996), 1-4, pp 192-197. J. Sivaraman, R. Coloumbe, M.C. Magny,P. Mason,J.S. Mort,M. Cygler. Crystallization of rat procathepsin B. Acta Crystallographica. D 52 (1996), 874-875. A.J. Fisher, T.B. Thompson, J.B. Thoden, T.O. Baldwin, I. Rayment. The 1.5-A resolution crystal structure of bacterial luciferase in low salt conditions. Journal of Biological Chemistry. 271 (1996), 21956-21968. Y. Korkhin, F. Frolow, O. Bogin, M. Peretz, A.J. Kalb (Gilboa), Y. Burstein. Crystalline alcohol dehydrogenases from the mesophilic bacterium Clostridium beijerinckii and the thermophilic bacterium Thermoanaerobium brockii: preparation, characterization and molecular symmetry. Acta Crystallographica. D 52 (1996), pp 882-886. E. Conti, L.F. Lloyd, J. Atkins, N.P. Franks, P. Brick. Crystallization and preliminary diffraction studies of firefly luciferase from Photinus pyralis. Acta Crystallographica. D 52 (1996), 4, pp 876-878. N.E. Chayen, E.J. Gordon, S.E.V. Phillips, E.E.G. Saridakis, P.F. Zagalsky. Crystallization and initial x-ray analysis of beta-crustacyanin, the dimer of apoproteins A(2) and C-1, each with a bound astaxanthin molecule. Acta Crystallographica. D 52 (1996), pp 409-410. A.J. Fisher, F.M. Raushel, T.O. Baldwin, I. Rayment. Three-dimensional structure of bacterial luciferase from Vibrio harveyi at 2.4 A resolution. Biochemistry. 34 (1995), 6581-6586. B.P. O’Hara, A.M. Hemmings, D.J. Buttle, L.H. Pearl. Crystal-structure of glycyl endopeptidase from carcia-papaya - a cysteine endopeptidase of unusual substrate-specificity. Biochemistry. 34 (1995), 40, 13190-13195. R. Savva, L.H. Pearl. Cloning and expression of the uracil-DNA glycosylase inhibitor (UGI) from bacteriophage-PBS-1 and crystallization of a uracil-DNA glycosylase-UGI complex. Proteins-Structure Function and Genetics. 22 (1995), 3, pp 287-289.
L. Pearl, B.O’Hara, R.Drew, S.Wilson. Crystal Structure of AmiC: the controller of transcription antitermination in the amidase operon of Pseudomonas earuginosa. EMBO Journal 13. (1994), pp 5810-5817. A. Zagari, L. Savino, S. Capasso, F. Sica, L. Mazzarella, A.D. Luccia, L. Ferrara. Crystallization and preliminary X-ray analysis of the river buffalo (bubalus bubalis L.) BB phenotype carbonmonoxyhaemoglobin. Acta Crystallographica. D 50 (1994), pp 778-780. R. Savva, L.H. Pearl. Crystallization and preliminary X-ray analysis of the Uracil-DNA Glycosylase DNA repair Enzyme from Herpes simplex virus type 1. Journal of Molecular Biology. 234 (1993), 910-912. L.H. Pearl, D Demasi, A.M. Hemmings, F. Sica, L. Mazzarella, C.A. Raia, S. Dauria, M. Rossi. Crystallization and preliminary x-ray analysis of an NAD+dependent alcohol-dehydrogenase from the extreme thermophilic archaebacterium sulfolobus-solfataricus. Journal of Molecular Biology. 229 (1993), 3, pp 782-784. L.H. Pearl, A.M. Hemmings, R. Nucci, M. Rossi. Crystallization and preliminary x-ray analysis of the beta-galactosidase from the extreme thermophilic archaebacterium sulfolobus-solfataricus. Journal of Molecular Biology. 229 (1993), 2, pp 561-563. D.H. Peapus, R.W. Janes, B.A. Wallace. Preliminary crystallization and X-ray analysis of orthorhombic human endothelin. Journal of Molecular Biology. 234 (1993), 4, pp 1250-1252. J. Sakon, H.H. Liao, A.M. Kanikula, M.M. Benning, I. Rayment, H.M. Holden. Molecular structure of kanamycin nucleotidyltransferase determined to 3.0-A resolution. Biochemistry. 32 (1993), 45, pp 1197-1198. D.H. Peapus, R.W. Janes, B.A. Wallace. Preliminary crystallization and X-ray analysis of orthorhombic human endothelin. Journal of Molecular Biology. 234 (1993), 4, pp 125-125.
J. Sakon, H.H. Liao, A.M. Kanikula, M.M. Benning, I. Rayment, H.M. Holden. Molecular structure of kanamycin nucleotidyltransferase determined 3.0-A resolution. Biochemistry. 32 (1993), 45, pp 1197-1198.
H.M. Holden, M. Ito, D.J. Hartshorne, I. Rayment. X-ray structure determination of telokin, the C-terminal domain of myosin light chain kinase, at 2.8 Angstrom resolution. Journal of Molecular Biology. 227 (1992), 3, pp 840-851. A.J. Bauer, I. Rayment, P.A. Frey, H.M. Holden. The isolation, purification, and preliminary crystallographic characterization of UDP-galactose-4-epimerase from Escherichia coli. Proteins. 9 (1991), 2, pp 13-14. L.F. Lloyd, P. Brick, L. Mei-Zhen, N.E. Chayen, D.M.Blow. Many crystal forms of human immunodeficiency virus reverse transcriptase. Journal of Molecular Biology. 217 (1991), pp 19-22. S.A. Wilson, N.E. Chayen, A.M. Hemmings, R.E. Drew, L.H. Pearl. Crystallization of and Preliminary X-ray Data for the Negative Regulator (AmiC) of the Amidase Operon of Pseudomonas-aeruginosa. Journal of Molecular Biology. 222 (1991), 4, pp 869-871. Microbatch Crystallization Using Alternative Containers: R. Varadarajan, F.M. Richards. Crystallographic Structures of Ribonuclease S Variants with Nonpolar Substitution at Position 13 Packing and Cavities. Biochemistry. 31 (1992), PP 1231-1232. Rawas, K. Moreton, H. Muirhead, J. Williams. Preliminary crystallographic studies on duck ovotransferrin. Journal of Molecular Biology. 208 (1989), pp 21-21. P.R. Evans, G.W. Farrants, M.C. Lawrence. Crystallographic structure of allosterically inhibited phosphofructokinase at 7A resolution. Journal of Molecular Biology. 191 (1986), pp 71-72.
|
|
©2008 Douglas Instruments Ltd |
